C++ mpi module for stochmagnet_main Package
Public Member Functions | Static Public Member Functions | Protected Member Functions | List of all members
SM_CrystalStructuresBuilder Class Referenceabstract

This class is an interface class for method for building a grid of crystal structure. More...

#include <SM_CrystalStructuresBuilder.h>

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Public Member Functions

virtual tMemSize getMemorySize () const
 return the memory size of the class and the memory size of all its attributes/associations More...
 
virtual tMemSize getContentsMemorySize () const
 return the memory size of the included associations More...
 
virtual void getNetworkSliceMaxSizeOffset (const SM_CrystalStructure &cStructure, const std::array< tInteger, SM_Constants::DIM > &Ns, const std::array< tBoolean, SM_Constants::DIM > &periodicity, std::valarray< tIndex > &sliceParticlesNumberOffset) const =0
 get the max size of the network More...
 
virtual void buildNetworkSliceSet (const tInteger &slicesNumber, const tInteger &sliceIndex, const std::array< tReal, SM_Constants::DIM > &X0, const std::array< tInteger, SM_Constants::DIM > &Ns, const std::array< tReal, SM_Constants::DIM > &Hs, const std::array< tBoolean, SM_Constants::DIM > &periodicity, const std::valarray< tMask > &mask, tIndex &nParticles, tIndex *particles, tReal *X, tIndex *neighborsNumberPerParticle, tIndex &nNeighboringParticles, tIndex *neighboringParticlesList) const =0
 build a network based on a decomposed in slice sets More...
 
virtual tIndex getNetworkGridMaxSize (const SM_CrystalStructure &cStructure, const std::array< tInteger, SM_Constants::DIM > &Ns, const std::array< tBoolean, SM_Constants::DIM > &isPeriodic, const std::array< tInteger, SM_Constants::DIM > &gridSize, const std::array< tInteger, SM_Constants::DIM > &gridIndex) const =0
 get the max size of the network More...
 
virtual void buildNetworkGridSet (const std::array< tInteger, SM_Constants::DIM > &gridsNumber, const std::array< tInteger, SM_Constants::DIM > &gridIndex, const std::array< tReal, SM_Constants::DIM > &X0, const std::array< tInteger, SM_Constants::DIM > &Ns, const std::array< tReal, SM_Constants::DIM > &Hs, const std::array< tBoolean, SM_Constants::DIM > &periodicity, const std::valarray< tMask > &mask, tIndex &nParticles, tIndex *particles, tReal *X, tIndex *neighborsNumberPerParticle, tIndex &nNeighboringParticles, tIndex *neighboringParticlesList) const =0
 build a network based on a nD paver grid decomposed in grid sets More...
 
- Public Member Functions inherited from SM_Object
 SM_Object (void)
 create
 
virtual ~SM_Object (void)
 destroy
 
- Public Member Functions inherited from CORE_Object
template<class T >
std::shared_ptr< T > getSharedPointer ()
 return the shared pointer for this More...
 
template<class T >
std::shared_ptr< const T > getConstSharedPointer () const
 return a const shared pointer for this More...
 
template<class T >
tBoolean isInstanceOf () const
 test if the clas T is an instance of this class More...
 
tString getClassName () const
 return the name of the class More...
 
tString getPointerString () const
 retrun the pointer of the class as a string More...
 
tString getIdentityString () const
 retrun the string identification of the class More...
 
virtual tString toString () const
 return the string representation of the object node More...
 

Static Public Member Functions

static void RegisterParticle (const tIndex &indexParticle, const std::array< tReal, SM_Constants::DIM > &P, const std::map< tIndex, tIndex > &neighboringParticlesOrderedList, tIndex &nParticles, tIndex *&iParticles, tReal *&iX, tIndex *&iNeighborsNumberPerParticle, tIndex &nNeighboringParticles, tIndex *&iNeighboringParticlesList)
 register particles in network list data More...
 
- Static Public Member Functions inherited from CORE_Object
static tBoolean EnableMemoryStack (const tBoolean &isMemoryChecked)
 enable the memory stack More...
 
static void EnableMemoryStack ()
 enable the memory stack
 
static void DisableMemoryStack ()
 disable the memory stack
 
static tBoolean IsMemoryStackEnabled ()
 return trur if the memory stack is enabled
 
static tString MemoryStackToString ()
 get the memory stack in string More...
 
static tIndex GetRegisteredClassesNumber ()
 get the memory stack in string More...
 

Protected Member Functions

 SM_CrystalStructuresBuilder (void)
 create an instance class
 
virtual ~SM_CrystalStructuresBuilder (void)
 destroy the instance of the class
 
- Protected Member Functions inherited from CORE_Object
 CORE_Object ()
 build an instance of the object
 
virtual ~CORE_Object ()
 destroy the instance of object std

 

Detailed Description

This class is an interface class for method for building a grid of crystal structure.

Author
Stephane Despreaux
Version
3.0

Member Function Documentation

◆ buildNetworkGridSet()

virtual void SM_CrystalStructuresBuilder::buildNetworkGridSet ( const std::array< tInteger, SM_Constants::DIM > &  gridsNumber,
const std::array< tInteger, SM_Constants::DIM > &  gridIndex,
const std::array< tReal, SM_Constants::DIM > &  X0,
const std::array< tInteger, SM_Constants::DIM > &  Ns,
const std::array< tReal, SM_Constants::DIM > &  Hs,
const std::array< tBoolean, SM_Constants::DIM > &  periodicity,
const std::valarray< tMask > &  mask,
tIndex &  nParticles,
tIndex *  particles,
tReal *  X,
tIndex *  neighborsNumberPerParticle,
tIndex &  nNeighboringParticles,
tIndex *  neighboringParticlesList 
) const
pure virtual

build a network based on a nD paver grid decomposed in grid sets

Parameters
[in]gridsNumber: number of grid sets per coordinate
[in]gridIndex: index of the grid set to build in [0,gridsNumber[ per coordinate
[in]X0: min point of the paver grid
[in]Ns: number of cells per direction of th paver grid
[in]Hs: cell size per direction in angstrom
[in]periodicity: periodicity of the paver per dierction
[in]mask: indicates if the cel lis in geometry (0: to be out of the geometry)
[out]nParticlesnumber of particles of the set
[out]particles: index of particles of the pack of size >= nParticles
[out]X: SM_Constants::DIM coordinates of the particles of the pack of size >= nParticles x SM_Constants::DIM
[out]neighborsNumberPerParticle: number of neighboring particles of the particles
[out]nNeighboringParticles: number of neghboring particles
[out]neighboringParticlesList: list of neighboring particles of size >= nNeighboringParticles

Implemented in SM_FCCStructuresBuilder, SM_BCCStructuresBuilder, and SM_BCC2StructuresBuilder.

◆ buildNetworkSliceSet()

virtual void SM_CrystalStructuresBuilder::buildNetworkSliceSet ( const tInteger &  slicesNumber,
const tInteger &  sliceIndex,
const std::array< tReal, SM_Constants::DIM > &  X0,
const std::array< tInteger, SM_Constants::DIM > &  Ns,
const std::array< tReal, SM_Constants::DIM > &  Hs,
const std::array< tBoolean, SM_Constants::DIM > &  periodicity,
const std::valarray< tMask > &  mask,
tIndex &  nParticles,
tIndex *  particles,
tReal *  X,
tIndex *  neighborsNumberPerParticle,
tIndex &  nNeighboringParticles,
tIndex *  neighboringParticlesList 
) const
pure virtual

build a network based on a decomposed in slice sets

Parameters
[in]slicesNumber: number of slice sets
[in]sliceIndex: index of the slice set to build in [0,slicesNumber[
[in]X0: min point of the paver grid
[in]Ns: number of cells per direction of th paver grid
[in]Hs: cell size per direction in angstrom
[in]periodicity: periodicity of the paver per dierction
[in]mask: indicates if the cel lis in geometry (0: to be out of the geometry)
[out]nParticlesnumber of particles of the set
[out]particles: index of particles of the pack of size >= nParticles
[out]X: SM_Constants::DIM coordinates of the particles of the pack of size >= nParticles x SM_Constants::DIM
[out]neighborsNumberPerParticle: number of neighboring particles of the particles
[out]nNeighboringParticles: number of neghboring particles
[out]neighboringParticlesList: list of neighboring particles of size >= nNeighboringParticles

Implemented in SM_FCCStructuresBuilder, SM_BCCStructuresBuilder, and SM_BCC2StructuresBuilder.

◆ getContentsMemorySize()

virtual tMemSize SM_CrystalStructuresBuilder::getContentsMemorySize ( ) const
inlinevirtual

return the memory size of the included associations

Returns
the memory size of the storage in bytes 1 Kb = 1024 bytes 1 Mb = 1024 Kb 1 Gb = 1024 Mb 1 Tb = 1024 Gb 1 Hb = 1024 Tb

Reimplemented from CORE_Object.

Reimplemented in SM_FCCStructuresBuilder, SM_BCCStructuresBuilder, and SM_BCC2StructuresBuilder.

◆ getMemorySize()

virtual tMemSize SM_CrystalStructuresBuilder::getMemorySize ( ) const
inlinevirtual

return the memory size of the class and the memory size of all its attributes/associations

Returns
the memory size of the class and the memory size of its attributes/associations in bytes The mamory size is :
  • the added size of the base classes which contains:
    • the primary attributes size depends on the order: (first delare the smallest attributes size
    • all virtual functions costs <pointer-size> (4 32xor 8 64x) bytes by virtual function
    • virtual inherihtance will increase of (4 or 8) bytes
  • we add the size of the contains values of the attributes : for example the size of a string is the length of the string 1 octet = 1 byte 1 Ko = 1024 bytes 1 Mo = 1024 Ko 1 Go = 1024 Mo

Reimplemented from SM_Object.

Reimplemented in SM_FCCStructuresBuilder, SM_BCCStructuresBuilder, and SM_BCC2StructuresBuilder.

◆ getNetworkGridMaxSize()

virtual tIndex SM_CrystalStructuresBuilder::getNetworkGridMaxSize ( const SM_CrystalStructure cStructure,
const std::array< tInteger, SM_Constants::DIM > &  Ns,
const std::array< tBoolean, SM_Constants::DIM > &  isPeriodic,
const std::array< tInteger, SM_Constants::DIM > &  gridSize,
const std::array< tInteger, SM_Constants::DIM > &  gridIndex 
) const
pure virtual

get the max size of the network

Parameters
[in]cStructurecrystal structure
[in]Nsnumber of cells of the paver grid per direction
[in]isPeriodic: periodicity of the paver per direction
[in]gridSize: size of the grid of structures
[in]gridIndex: index of the grid to build the crystal structures

Implemented in SM_FCCStructuresBuilder, SM_BCCStructuresBuilder, and SM_BCC2StructuresBuilder.

◆ getNetworkSliceMaxSizeOffset()

virtual void SM_CrystalStructuresBuilder::getNetworkSliceMaxSizeOffset ( const SM_CrystalStructure cStructure,
const std::array< tInteger, SM_Constants::DIM > &  Ns,
const std::array< tBoolean, SM_Constants::DIM > &  periodicity,
std::valarray< tIndex > &  sliceParticlesNumberOffset 
) const
pure virtual

get the max size of the network

Parameters
[in]cStructurecrystal structure
[in]Nsnumber of cells of the paver grid per direction
[in]periodicity: periodicity of the paver per direction
[out]sliceParticlesNumberOffsetindex of first particle within a global list sliceParticlesNumberOffset[i+1]-sliceParticlesNumberOffset[i+1] is the maw number of particles of the slice

Implemented in SM_FCCStructuresBuilder, SM_BCCStructuresBuilder, and SM_BCC2StructuresBuilder.

◆ RegisterParticle()

static void SM_CrystalStructuresBuilder::RegisterParticle ( const tIndex &  indexParticle,
const std::array< tReal, SM_Constants::DIM > &  P,
const std::map< tIndex, tIndex > &  neighboringParticlesOrderedList,
tIndex &  nParticles,
tIndex *&  iParticles,
tReal *&  iX,
tIndex *&  iNeighborsNumberPerParticle,
tIndex &  nNeighboringParticles,
tIndex *&  iNeighboringParticlesList 
)
inlinestatic

register particles in network list data

Parameters
[in]indexParticleid of the particle
[in]Pcoordinate of the particle
[in]neighboringParticlesOrderedList: neighboring particles orderd list of the particle at P
[in,out]nParticlesiterator on cumulative number of particles
[in,out]iParticlesiterator on index of particles
[in,out]iX: iterator on coordinates of particles
[in,out]iNeighborsNumberPerParticle: iterator on number of neighboring particles for each particle
[in,out]nNeighboringParticles: cumulative number of neighboring particles
[in,out]iNeighboringParticlesListiterator on list of neighoring particles odred per particle

The documentation for this class was generated from the following file: